!BRIEF <molfile> [<outfile>]

!PARAMETER -in
  !ALIAS -i
  !TYPE string
  !BRIEF Input molecule (usually a pdb file)
  !REQUIRED true
  !KEYLESS 1
!END
!PARAMETER -out
  !ALIAS -o
  !TYPE string
  !DEFAULT splitmolcomplex.oeb.gz
  !BRIEF Output molecule (usually an oeb)
  !REQUIRED false
  !KEYLESS 2
!END
!PARAMETER -a
  !TYPE bool
  !DEFAULT false
  !BRIEF If true, show all binding sites, not just the first
  !REQUIRED false
!END
!PARAMETER -c
  !TYPE bool
  !DEFAULT false
  !BRIEF If true, split covalent ligands
  !REQUIRED false
!END
!PARAMETER -s
  !TYPE bool
  !DEFAULT false
  !BRIEF If true, separate residues before recombining (to return just binding site res)
  !REQUIRED false
!END
!PARAMETER -pw
  !TYPE bool
  !DEFAULT false
  !BRIEF If true, combine protein and water into the same output mol (ignore other options)
  !REQUIRED false
!END
